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Module 2: Setting up from day one

Project naming, time records and cost coding that take minutes now and save weeks later, with a setup checklist of what to record, in which tool, owned by whom and how often.

Startups and Scale-upsLast reviewed 2 October 2026

The difference between a first claim that goes smoothly and one that stalls is rarely the tax rules. It is whether the company can name its projects, show who worked on what, and pull costs by project from the ledger. After this module you will be able to set up those three habits in an early-stage company, so that the records every scheme asks for already exist when the claim is prepared.

What this module covers

  • Why the seven schemes all ask for the same three things: a defined project, a link from people and costs to it, and records made at the time.
  • Project naming: one name, defined by its technical uncertainty, used in every system.
  • Time records that will survive a reviewer's questions.
  • Cost coding in the ledger, including the facts about contractors, materials and grants you will need later.

What every scheme asks for

Strip away the forms and the seven schemes ask a first-time claimant three questions. What was the project, and what scientific or technological uncertainty did it set out to resolve? Who did the work, and how much of their time went to it? Which costs belong to it? The wording on each country's documentation page differs, but every one expects records made at the time rather than reconstructed when the claim is prepared, and every one expects staff costs to be apportioned using timesheets or another reasonable and consistent method supported by records. Three habits, set up in the first month, answer all three questions as a by-product of running the company.

Project naming: one name, used everywhere

For incentive purposes a project is the work done to resolve one uncertainty. Name it that way from the start.

  1. Define it by its uncertainty. One sentence: what the team did not know how to achieve, and why existing knowledge did not answer it. "Launch the dashboard by March" is a commercial goal. "Detect gripper slip on wet surfaces at production speed" is a project.
  2. Give it a short code and use it in the issue tracker, the repository, the timesheets, the ledger and board updates. Reviewers test the consistency between the technical description and the financial records; a shared code is what makes them consistent.
  3. Keep a project register: code, name, the uncertainty sentence, the engineer who judged it uncertain, start date, status and end date. Dates matter because several schemes bound the claim by the uncertainty. In the United Kingdom, for example, R&D begins when work to resolve the scientific or technological uncertainty starts and ends when the uncertainty is resolved or work on it ceases.
  4. Record who the competent professional is. Most schemes judge uncertainty by what a competent professional in the field could not readily resolve from existing knowledge. Name that person now, with their relevant expertise; it is hard to do credibly two years later.

What goes wrong: projects named after features or clients, so that qualifying and routine work share a code; and projects with no recorded end, so that later maintenance is swept in.

Time records that survive review

Staff costs are the largest eligible cost for almost every early-stage company, and they are claimed in proportion to time spent on the project.

  • Record by project code and by activity, for everyone whose cost will be claimed, including founders who draw a salary. Activity labels let excluded work be separated later: "experiment on slip threshold" and "fix fault in shipped release" differ even under one project.
  • Record weekly, by the person who did the work. Weekly entries by the engineer are records made at the time. Percentages assigned by a manager at year end are estimates, and reviewers treat them as such.
  • Record non-project time too. An apportionment is credible only if the denominator is real. Entries for sales support, general management and administration show that the claimed share was measured, not assumed.
  • Keep the raw record. Export the timesheet data at period end and store it with the register.

What goes wrong: the same round number for everyone, records created after the claim was drafted, and time logged to a project after its uncertainty was resolved.

Cost coding in the ledger

Add a project dimension to the chart of accounts, or a tracking category in the accounting software, and apply it at the point of entry, so that a schedule of costs by project and category falls out of the ledger. Capture these facts as costs arrive; each is tested by at least one scheme and all are hard to find later.

Cost typeRecord at the point of entryWhy it is tested later
PayrollEmployee, project code, time share from the timesheet, employer contributionsApportionment is the most common review question; several schemes limit or exclude amounts for owners and directors.
Contractors and agency staffWho did the work, where it was physically done, whether the contractor is connected to the company, what the contract says about who owns the resultsMost schemes limit the qualifying share of contractor costs, restrict work done outside the country and let only one party claim.
Materials and consumablesProject code; consumed in testing, or incorporated into a product that was soldItems incorporated into products sold are excluded or adjusted in several schemes.
Grants and customer fundingProject funded, amount, the agreement and its terms on ownership and riskReduces, excludes or claws back the benefit in most countries (Module 3).

Setup checklist

WhatToolOwnerHow often
Project register: code, name, uncertainty sentence, competent professional, dates, status; the same codes in the issue tracker and repositorySpreadsheet or wiki page; labels or epics in the existing trackerTechnical leadWhen a project starts, changes or ends; reviewed at each board meeting
Time records by project code and activityTimesheet feature of the payroll or project tool, or a shared sheetEach engineer; finance checks completenessWeekly entries; monthly check
Project dimension in the ledgerTracking category in the accounting softwareFinance lead or bookkeeperSet up once; every entry
Contractor file: location of work, connection, ownership and risk termsFolder with the signed contractFinance leadWhen a contractor is engaged
Grant and funding file: agreement, amounts, project funded, tax treatment in the offerFolder per agreementFounder or finance leadOn signing and on receipt
Evidence: experiment notes, test results, design decisions, failed approachesEngineering wiki or tracker, linked to the project codeEach engineerAs the work happens; summary at each milestone
Period-end export of timesheets, register and evidence indexArchive with the year's accountsFinance leadEach year end

Illustrative example

Illustrative example. Harbour Robotics Ltd, a hypothetical company, has five engineers and total staff costs of 100,000 in its first year. In month one the technical lead opens a project register with two entries: SLIP, detecting gripper slip on wet surfaces at production speed, and DASH, a customer dashboard built with the company's usual web stack. Engineers log time weekly against SLIP, DASH and three non-project labels. At year end the logs show 60,000 of staff cost against SLIP and 25,000 against DASH.

DASH involved no technological uncertainty, because the dashboard used known methods, so it is excluded without argument. Within SLIP, activity labels show 10,000 of time spent fixing faults in the shipped release after the uncertainty was resolved, which is excluded too. Eligible staff costs are 50,000, and the benefit is 50,000 at that country's rate. Without the logs, a year-end guess of 70 percent across all engineers would have put 70,000 into the claim with nothing to support it.

Across the seven countries

CountryRecords expected
United StatesRecords that link each business component to the four-part test and to the wages, supplies and contract research costs you claim.
United KingdomProject records that show the advance sought, the uncertainties and how the work resolved them, and which competent professionals judged the uncertainty.
IrelandRecords made at the time that show the scientific or technological uncertainty, the work carried out to resolve it and the expenditure incurred.
CanadaRecords made as the work happens, such as hypotheses, test results and time records, that show the systematic investigation.
AustraliaRecords that show the hypothesis, the experiments, the results and the conclusions for each registered activity, and that link expenditure to those activities.
New ZealandRecords that show each core activity, the uncertainty it addresses and the systematic approach taken, and link expenditure to it.
SingaporeDocuments that show each project's objective, its novelty or technical risk, the work done and the qualifying expenditure.

Where to go next

Self-check questions

Answer each question, then open it to compare.

What three questions do all seven schemes ask of a first-time claimant, and which habit answers each?
What was the project and what uncertainty did it set out to resolve (the project register). Who did the work and how much of their time went to it (time records by project code). Which costs belong to it (a project dimension in the ledger).
Why should a project be named after its technical uncertainty rather than after a product, customer or quarter?
Because the schemes define the unit of claim by the uncertainty and the work done to resolve it. A project named after a feature or client mixes qualifying and routine work under one code, and gives no record of when the uncertainty was resolved, so later maintenance work gets swept in.
What makes a time record a record made at the time, and what are the two most common failures?
Entries made weekly by the person who did the work, against a project code and an activity label. The common failures are percentages assigned by a manager at year end, and the same round number for every engineer.
Name four facts about a contractor that should be captured when the contract is signed.
Who did the work, where it was physically done, whether the contractor is connected to the company, and what the contract says about who owns the results and who bears the risk. Most schemes limit the share of contractor costs that qualifies, restrict work done outside the country and let only one party claim.
Why record non-project time as well as project time?
An apportionment is only credible if the denominator is real. Entries for sales support, general management and administration show that the claimed share of each person's time was measured rather than assumed.

Official sources

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Educational content only, not tax advice. See the disclaimer.